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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1369058 chr18:44998839 C/T MEX3C chr18:48700920-48744674:- 0.77 6.72 6.53E-11 Box Plot
BLCA rs1369058 chr18:44998839 C/T PIK3C3 chr18:39535171-39667794:+ 0.86 7 1.13E-11 Box Plot
BLCA rs1369058 chr18:44998839 C/T RPL17 chr18:47014823-47018893:- 0.65 6.45 3.36E-10 Box Plot
BLCA rs1369058 chr18:44998839 C/T SMAD4 chr18:48554764-48611415:+ 0.78 6.62 1.2E-10 Box Plot
BLCA rs1369058 chr18:44998839 C/T ZNF24 chr18:32912176-32925446:- 0.73 6.38 5.07E-10 Box Plot
BLCA rs1370625 chr2:101080442 A/G LOC285359 chr3:101431278-101432259:+ 0.39 7.31 1.56E-12 Box Plot
BLCA rs1378358 chr17:44787312 C/T LOC644172 chr17:43677491-43679748:- 1.18 18.94 6.17E-57 Box Plot
BLCA rs1378358 chr17:44787312 C/T LRRC37A4 chr17:43578685-43595516:- -0.61 -10.8 6.32E-24 Box Plot
BLCA rs1378358 chr17:44787312 C/T MGC57346 chr17:43697712-43715327:+ 0.53 7.43 6.94E-13 Box Plot
BLCA rs1378836 chr3:117650681 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.14 6.09 2.82E-9 Box Plot
BLCA rs1379830 chr13:54407436 A/T NCOR1 chr17:15932471-16121499:- 0.3 6.26 1.05E-9 Box Plot
BLCA rs1379834 chr13:54444072 T/C NCOR1 chr17:15932471-16121499:- 0.29 6.05 3.53E-9 Box Plot
BLCA rs138024639 chr6:28436014 TAAACATA/T ZFP57 chr6:29640169-29648887:- 0.72 6.81 3.78E-11 Box Plot
BLCA rs138278759 chr6:28055592 A/AAG ZFP57 chr6:29640169-29648887:- 0.76 6.83 3.43E-11 Box Plot
BLCA rs138289692 chr11:77685597 CATA/C INTS4L1 chr7:64601603-64694600:+ 0.47 6.59 1.43E-10 Box Plot